STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNH8Potassium voltage-gated channel subfamily H member 8. (1109 aa)    
Predicted Functional Partners:
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.751
ENSSARP00000010841
annotation not available
   
  
 0.699
RAB40B
RAB40B, member RAS oncogene family.
      
 0.662
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent 1F.
    
 
 0.545
PKIA
cAMP-dependent protein kinase inhibitor alpha.
      
 0.537
ENSSARP00000003216
annotation not available
      
 0.536
AKR7L
Aldo-keto reductase family 7 like (gene/pseudogene).
    
 0.536
RASL12
RAS like family 12.
    
 
 0.535
TMEM161B
Transmembrane protein 161B.
      
 0.530
DCUN1D3
Defective in cullin neddylation 1 domain containing 3.
     
 0.520
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.