Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000000050annotation not available (136 aa)    
Predicted Functional Partners:
HAT1
Histone acetyltransferase 1.
    
 0.946
H2AZ2
Histone H2A.V.
   
 0.882
H2BC3
H2B clustered histone 3.
   
 0.881
CBX1
Chromobox 1.
    
 0.881
ENSSARP00000001853
annotation not available
   
 0.847
LOC101537522
Histone H2A type 1.
   
 0.847
ENSSARP00000008074
annotation not available
   
 0.847
LOC101559105
Histone H4.
   
 0.847
LOC101554861
Histone H2B type 1-A.
   
 0.836
KDM6A
Lysine demethylase 6A.
   
 0.829
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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