STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF7Ring finger protein 7. (112 aa)    
Predicted Functional Partners:
CUL5
Cullin 5.
    
 0.999
ENSSARP00000005386
annotation not available
   
 0.998
ARIH2
Ariadne RBR E3 ubiquitin protein ligase 2.
    
 0.986
CUL2
Cullin 2.
    
 0.986
CUL3
Cullin 3.
    
 0.983
UBXN7
UBX domain protein 7.
    
 0.980
UBE2M
Ubiquitin conjugating enzyme E2 M.
    
 0.975
NEDD8
NEDD8 ubiquitin like modifier.
   
 0.972
ENSSARP00000003012
annotation not available
    
 0.969
CAND1
Cullin associated and neddylation dissociated 1.
    
 0.947
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.