Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGALS3Galectin 3. (210 aa)    
Predicted Functional Partners:
LGALS1
Galectin 1.
   
 0.974
ALOX5AP
Arachidonate 5-lipoxygenase activating protein.
   
  
 0.914
ENSSARP00000000215
annotation not available
    
 0.890
EGFR
Epidermal growth factor receptor.
    
 
 0.871
SLC12A2
Solute carrier family 12 member 2.
    
 
 0.852
ENSSARP00000007022
annotation not available
    
  0.849
ALCAM
Activated leukocyte cell adhesion molecule.
    
 
 0.832
LAMA1
Laminin subunit alpha 1.
    
  0.825
SLC12A6
Solute carrier family 12 member 6.
    
   0.803
ITGB1
Integrin subunit beta 1.
   
 0.800
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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