Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C3orf62Chromosome unknown open reading frame, human C3orf62. (261 aa)    
Predicted Functional Partners:
CREBBP
CREB binding protein.
    
 
 0.724
ENSSARP00000007838
annotation not available
    
   0.629
ENSSARP00000009515
annotation not available
    
   0.629
CCDC36
Coiled-coil domain containing 36.
      
 0.583
TSEN34
tRNA splicing endonuclease subunit 34.
      
 0.494
ENSSARP00000006232
annotation not available
  
     0.492
ENSSARP00000009842
annotation not available
      
 0.472
IL5
Interleukin 5.
  
     0.441
ENSSARP00000001552
annotation not available
  
     0.426
RNF24
Ring finger protein 24.
      
 0.425
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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