STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000000079annotation not available (258 aa)    
Predicted Functional Partners:
PPARGC1A
PPARG coactivator 1 alpha.
    
 
 0.783
AFP
Alpha fetoprotein.
   
  
 0.764
MED1
Mediator complex subunit 1.
    
 0.746
HNF1B
HNF1 homeobox B.
   
 0.711
NCOR1
Nuclear receptor corepressor 1.
    
 0.679
NR0B2
Nuclear receptor subfamily 0 group B member 2.
   
 0.669
NCOA1
Nuclear receptor coactivator 1.
    
 
 0.648
NCOA2
Nuclear receptor coactivator 2.
    
 
 0.631
ENSSARP00000006521
annotation not available
    
   0.579
ENSSARP00000007314
annotation not available
   
  
 0.567
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.