Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000000093annotation not available (323 aa)    
Predicted Functional Partners:
NEFH
Neurofilament heavy.
    
  0.660
HOOK3
Hook microtubule tethering protein 3.
    
 
 0.652
ENSSARP00000003618
annotation not available
    
 
 0.632
RNF10
Ring finger protein 10.
      
 0.623
ENSSARP00000007706
annotation not available
    
 
 0.617
ENSSARP00000000599
annotation not available
    
 
 0.615
ACTR1A
Actin related protein 1A.
    
 
 0.610
ACTR1B
Actin related protein 1B.
    
 
 0.610
CCDC125
Coiled-coil domain containing 125.
      
 0.600
ENSSARP00000006823
annotation not available
   
 0.593
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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