Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA3Golgin A3. (1495 aa)    
Predicted Functional Partners:
TSNAX
Translin associated factor X.
    
 
 0.878
CENPJ
Centromere protein J.
    
 0.855
ENSSARP00000010587
annotation not available
   
 0.822
SMC4
Structural maintenance of chromosomes 4.
   
 0.798
PPP2R1B
Protein phosphatase 2 scaffold subunit Abeta.
    
  0.759
DPP7
Dipeptidyl peptidase 7.
      
 0.759
ENSSARP00000009309
annotation not available
   
 0.741
RND2
Rho family GTPase 2.
    
 0.739
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.737
ARL1
ADP-ribosylation factor-like protein 1.
    
 0.735
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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