STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA3Golgin A3. (1495 aa)    
Predicted Functional Partners:
ARL1
ADP-ribosylation factor-like protein 1.
    
  0.824
ENSSARP00000001712
annotation not available
      
 0.774
PPP2R2B
Protein phosphatase 2 regulatory subunit Bbeta.
    
 0.763
COG3
Component of oligomeric golgi complex 3.
    
 0.752
TRAPPC8
Trafficking protein particle complex 8.
   
 
 0.740
ENSSARP00000009309
annotation not available
   
 0.735
RND2
Rho family GTPase 2.
    
 0.723
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.689
SIRT3
Sirtuin 3.
    
  0.687
CSDE1
Cold shock domain containing E1.
    
 0.670
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.