STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VEGFDVascular endothelial growth factor D. (350 aa)    
Predicted Functional Partners:
KDR
Kinase insert domain receptor.
    
 0.975
FLT1
Fms related tyrosine kinase 1.
    
 0.953
VEGFC
Vascular endothelial growth factor C.
     
0.930
PDGFRA
Platelet derived growth factor receptor alpha.
    
 0.913
ENSSARP00000006815
annotation not available
     
 0.913
FLT3
Fms related tyrosine kinase 3.
    
 0.911
HGF
Hepatocyte growth factor.
     
 0.908
PDGFC
Platelet derived growth factor C.
     
 0.900
TEK
TEK receptor tyrosine kinase.
    
 0.898
ENSSARP00000001391
annotation not available
   
 0.894
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.