Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001028annotation not available (392 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
   
 0.975
RBX1
Ring-box 1.
    
 0.932
ENSSARP00000007898
annotation not available
   
 0.931
GLIS3
GLIS family zinc finger 3.
   
 0.931
SPOP
Speckle type BTB/POZ protein.
     
  0.909
AR
Androgen receptor.
    
 
 0.884
MYD88
MYD88 innate immune signal transduction adaptor.
    
 
 0.877
DEK
DEK proto-oncogene.
    
 
 0.877
NCOA3
Nuclear receptor coactivator 3.
    
 
 0.867
CAPRIN1
Cell cycle associated protein 1.
    
 
 0.854
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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