STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POMPProteasome maturation protein. (161 aa)    
Predicted Functional Partners:
ENSSARP00000001682
annotation not available
   
 0.998
PSMB4
Proteasome 20S subunit beta 4.
   
 0.998
PSMB2
Proteasome 20S subunit beta 2.
   
 0.997
PSMA3
Proteasome subunit alpha type-3.
   
 0.997
PSMA2
Proteasome 20S subunit alpha 2.
   
 0.996
PSMB9
Proteasome 20S subunit beta 9.
   
 0.996
PSMA4
Proteasome 20S subunit alpha 4.
   
 0.996
PSMA6
Proteasome 20S subunit alpha 6.
   
 0.996
PSMA8
Proteasome 20S subunit alpha 8.
   
 0.996
PSMA1
Proteasome 20S subunit alpha 1.
   
 0.995
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.