Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NELFANegative elongation factor complex member A. (464 aa)    
Predicted Functional Partners:
NELFE
Negative elongation factor complex member E.
   
 0.999
ENSSARP00000001499
annotation not available
    
 0.998
ENSSARP00000000943
annotation not available
    
 0.985
ENSSARP00000001412
annotation not available
    
 0.958
POLR2I
RNA polymerase II subunit I.
    
  0.953
ENSSARP00000005370
annotation not available
    
  0.951
POLR2D
RNA polymerase II subunit D.
    
  0.944
NCBP2
Nuclear cap binding protein subunit 2.
   
  0.938
ENSSARP00000001402
annotation not available
    
  0.930
POLR2B
RNA polymerase II subunit B.
    
  0.926
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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