STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001044annotation not available (1839 aa)    
Predicted Functional Partners:
ENSSARP00000003808
annotation not available
     
 0.811
ENSSARP00000000628
annotation not available
     
 0.654
SYP
Synaptophysin.
   
 
 0.646
SLC17A6
Solute carrier family 17 member 6.
     
 0.614
CAV1
Caveolin 1.
    
 0.614
TMC1
Transmembrane channel like 1.
   
 
 0.601
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
      
 0.586
USP33
Ubiquitin specific peptidase 33.
      
 0.551
MYO15A
Myosin XVA.
   
  
 0.545
ENSSARP00000002592
annotation not available
      
 0.544
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.