Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UNC5DUnc-5 netrin receptor D. (918 aa)    
Predicted Functional Partners:
NTN1
Netrin 1.
    
 0.996
NTN4
Netrin 4.
    
 0.984
DCC
DCC netrin 1 receptor.
    
 0.967
NTN5
Netrin 5.
    
 0.907
GPC3
Glypican 3.
    
 
 0.896
NEO1
Neogenin 1.
    
 0.878
RASGEF1B
RasGEF domain family member 1B.
      
 0.676
ENSSARP00000006425
annotation not available
      
 0.664
EVX2
Even-skipped homeobox 2.
    
 
 0.622
FEZF2
FEZ family zinc finger 2.
      
 0.620
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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