ENSSARP00000001048 protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSARP00000001048

annotation not available (894 aa)

Predicted Functional Partners:

SHOC1

0.756

IP6K1

0.755

SYCP2

0.750

PI4KB

0.719

M1AP

0.681

CEP290

0.676

ENSSARP00000010969

0.647

ENSSARP00000001520

0.637

ENSSARP00000008673

0.621

ENSSARP00000009714

0.618

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP290	ENSSARP00000001048	ENSSARP00000007870	ENSSARP00000001048	Centrosomal protein 290.	annotation not available	0.676
ENSSARP00000001048	CEP290	ENSSARP00000001048	ENSSARP00000007870	annotation not available	Centrosomal protein 290.	0.676
ENSSARP00000001048	ENSSARP00000001520	ENSSARP00000001048	ENSSARP00000001520	annotation not available	annotation not available	0.637
ENSSARP00000001048	ENSSARP00000008673	ENSSARP00000001048	ENSSARP00000008673	annotation not available	annotation not available	0.621
ENSSARP00000001048	ENSSARP00000009714	ENSSARP00000001048	ENSSARP00000009714	annotation not available	annotation not available	0.618
ENSSARP00000001048	ENSSARP00000010969	ENSSARP00000001048	ENSSARP00000010969	annotation not available	annotation not available	0.647
ENSSARP00000001048	IP6K1	ENSSARP00000001048	ENSSARP00000010015	annotation not available	Inositol hexakisphosphate kinase 1.	0.755
ENSSARP00000001048	M1AP	ENSSARP00000001048	ENSSARP00000009322	annotation not available	Meiosis 1 associated protein.	0.681
ENSSARP00000001048	PI4KB	ENSSARP00000001048	ENSSARP00000000671	annotation not available	Phosphatidylinositol 4-kinase beta.	0.719
ENSSARP00000001048	SHOC1	ENSSARP00000001048	ENSSARP00000012569	annotation not available	Shortage in chiasmata 1.	0.756
ENSSARP00000001048	SYCP2	ENSSARP00000001048	ENSSARP00000007939	annotation not available	Synaptonemal complex protein 2.	0.750
ENSSARP00000001520	ENSSARP00000001048	ENSSARP00000001520	ENSSARP00000001048	annotation not available	annotation not available	0.637
ENSSARP00000001520	ENSSARP00000009714	ENSSARP00000001520	ENSSARP00000009714	annotation not available	annotation not available	0.510
ENSSARP00000008673	ENSSARP00000001048	ENSSARP00000008673	ENSSARP00000001048	annotation not available	annotation not available	0.621
ENSSARP00000008673	ENSSARP00000009714	ENSSARP00000008673	ENSSARP00000009714	annotation not available	annotation not available	0.546
ENSSARP00000008673	ENSSARP00000010969	ENSSARP00000008673	ENSSARP00000010969	annotation not available	annotation not available	0.612
ENSSARP00000008673	SHOC1	ENSSARP00000008673	ENSSARP00000012569	annotation not available	Shortage in chiasmata 1.	0.594
ENSSARP00000009714	ENSSARP00000001048	ENSSARP00000009714	ENSSARP00000001048	annotation not available	annotation not available	0.618
ENSSARP00000009714	ENSSARP00000001520	ENSSARP00000009714	ENSSARP00000001520	annotation not available	annotation not available	0.510
ENSSARP00000009714	ENSSARP00000008673	ENSSARP00000009714	ENSSARP00000008673	annotation not available	annotation not available	0.546