Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A3Solute carrier family 25 member 3. (364 aa)    
Predicted Functional Partners:
ENSSARP00000010896
annotation not available
   
 
 0.983
ATP5F1B
ATP synthase F1 subunit beta.
   
  
 0.971
VDAC2
Voltage dependent anion channel 2.
   
 
 0.953
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
  
 0.941
SLC25A31
Solute carrier family 25 member 31.
   
 0.936
ENSSARP00000009005
annotation not available
   
  
 0.931
ENSSARP00000007429
annotation not available
   
 
 0.921
UQCRC2
Ubiquinol-cytochrome c reductase core protein 2.
   
  
 0.919
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 
 0.907
COX5A
Cytochrome c oxidase subunit 5A.
   
 
 0.906
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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