FBN2 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

FBN2

Fibrillin 2. (2902 aa)

Predicted Functional Partners:

MYSM1

0.809

NUDCD1

0.766

ENSSARP00000007169

0.754

ENSSARP00000010436

0.754

RBPJ

0.744

TGFB3

0.734

FBN1

0.728

ARID4B

0.719

ARID4A

0.701

ANKRD1

0.673

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKRD1	FBN1	ENSSARP00000007817	ENSSARP00000003230	Ankyrin repeat domain 1.	Fibrillin 1.	0.444
ANKRD1	FBN2	ENSSARP00000007817	ENSSARP00000001053	Ankyrin repeat domain 1.	Fibrillin 2.	0.673
ANKRD1	MYSM1	ENSSARP00000007817	ENSSARP00000002751	Ankyrin repeat domain 1.	Myb like, SWIRM and MPN domains 1.	0.771
ARID4A	ARID4B	ENSSARP00000006346	ENSSARP00000010804	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.870
ARID4A	FBN1	ENSSARP00000006346	ENSSARP00000003230	AT-rich interaction domain 4A.	Fibrillin 1.	0.701
ARID4A	FBN2	ENSSARP00000006346	ENSSARP00000001053	AT-rich interaction domain 4A.	Fibrillin 2.	0.701
ARID4A	MYSM1	ENSSARP00000006346	ENSSARP00000002751	AT-rich interaction domain 4A.	Myb like, SWIRM and MPN domains 1.	0.850
ARID4B	ARID4A	ENSSARP00000010804	ENSSARP00000006346	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.870
ARID4B	FBN1	ENSSARP00000010804	ENSSARP00000003230	AT-rich interaction domain 4B.	Fibrillin 1.	0.719
ARID4B	FBN2	ENSSARP00000010804	ENSSARP00000001053	AT-rich interaction domain 4B.	Fibrillin 2.	0.719
ARID4B	MYSM1	ENSSARP00000010804	ENSSARP00000002751	AT-rich interaction domain 4B.	Myb like, SWIRM and MPN domains 1.	0.856
ENSSARP00000007169	ENSSARP00000010436	ENSSARP00000007169	ENSSARP00000010436	annotation not available	annotation not available	0.899
ENSSARP00000007169	FBN1	ENSSARP00000007169	ENSSARP00000003230	annotation not available	Fibrillin 1.	0.744
ENSSARP00000007169	FBN2	ENSSARP00000007169	ENSSARP00000001053	annotation not available	Fibrillin 2.	0.754
ENSSARP00000010436	ENSSARP00000007169	ENSSARP00000010436	ENSSARP00000007169	annotation not available	annotation not available	0.899
ENSSARP00000010436	FBN1	ENSSARP00000010436	ENSSARP00000003230	annotation not available	Fibrillin 1.	0.744
ENSSARP00000010436	FBN2	ENSSARP00000010436	ENSSARP00000001053	annotation not available	Fibrillin 2.	0.754
FBN1	ANKRD1	ENSSARP00000003230	ENSSARP00000007817	Fibrillin 1.	Ankyrin repeat domain 1.	0.444
FBN1	ARID4A	ENSSARP00000003230	ENSSARP00000006346	Fibrillin 1.	AT-rich interaction domain 4A.	0.701
FBN1	ARID4B	ENSSARP00000003230	ENSSARP00000010804	Fibrillin 1.	AT-rich interaction domain 4B.	0.719