STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCC1Transmembrane and coiled-coil domain family 1. (653 aa)    
Predicted Functional Partners:
ENSSARP00000004587
annotation not available
      
 0.828
ENSSARP00000007549
annotation not available
      
 0.753
ENSSARP00000008746
annotation not available
      
 0.692
TMCC3
Transmembrane and coiled-coil domain family 3.
  
 
 
0.572
ENSSARP00000010801
annotation not available
      
 0.524
PHF23
PHD finger protein 23.
      
 0.522
ENSSARP00000004900
annotation not available
      
 0.522
KRTCAP3
Keratinocyte associated protein 3.
      
 0.512
ENSSARP00000002741
annotation not available
      
 0.491
ENSSARP00000008187
annotation not available
      
 0.465
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.