STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO5AMyosin VA. (1869 aa)    
Predicted Functional Partners:
ENSSARP00000005682
annotation not available
   
 0.920
ENSSARP00000010218
annotation not available
   
 0.920
CALM2
Calmodulin 2.
    
 0.890
EFCAB3
EF-hand calcium binding domain 3.
    
 0.868
RAB27A
RAB27A, member RAS oncogene family.
    
 0.849
ENSSARP00000001627
annotation not available
   
 0.840
RAB25
RAB25, member RAS oncogene family.
   
 0.814
SPIRE2
Spire type actin nucleation factor 2.
   
 0.813
EXOC4
Exocyst complex component 4.
    
 0.803
ENSSARP00000002382
annotation not available
    
 
 0.750
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.