STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBL3Ubiquitin like 3. (117 aa)    
Predicted Functional Partners:
NEDD8
NEDD8 ubiquitin like modifier.
      
 0.613
SUMO1
Small ubiquitin-related modifier 1-like.
      
 0.583
ATG5
Autophagy related 5.
      
 0.575
ATG3
Autophagy related 3.
      
 0.571
ENSSARP00000010170
annotation not available
      
 0.570
ENSSARP00000005378
annotation not available
      
 0.568
UFL1
UFM1 specific ligase 1.
      
 0.472
SLC16A1
Monocarboxylate transporter 1.
      
 0.472
UBA5
Ubiquitin like modifier activating enzyme 5.
      
 0.472
ATG10
Autophagy related 10.
      
 0.459
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.