Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMA2Laminin subunit alpha 2. (3112 aa)    
Predicted Functional Partners:
ENSSARP00000006097
annotation not available
    
 0.984
LAMB1
Laminin subunit beta 1.
   
 0.961
ITGA1
Integrin subunit alpha 1.
    
 0.955
NID1
Nidogen 1.
   
 0.951
ENSSARP00000004093
annotation not available
    
 0.950
ENSSARP00000006345
annotation not available
    
 0.950
COL4A6
Collagen type IV alpha 6 chain.
   
 0.935
NTN4
Netrin 4.
    
  0.922
LAMA1
Laminin subunit alpha 1.
    
  0.920
ITGB8
Integrin subunit beta 8.
    
 0.917
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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