STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001075annotation not available (252 aa)    
Predicted Functional Partners:
LOC101549174
39S ribosomal protein L47, mitochondrial-like.
    
 
 0.979
GTPBP8
GTP binding protein 8 (putative).
  
 
 0.962
MRM3
Mitochondrial rRNA methyltransferase 3.
  
 
 0.958
ENSSARP00000003091
annotation not available
   
 0.947
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.935
ENSSARP00000003020
annotation not available
  
 
 0.933
ENSSARP00000004157
annotation not available
    
 
 0.926
MRPL24
Mitochondrial ribosomal protein L24.
    
 
 0.924
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.923
ENSSARP00000009369
annotation not available
    
   0.922
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.