Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC1Zinc finger DHHC-type containing 1. (482 aa)    
Predicted Functional Partners:
TBK1
TANK binding kinase 1.
    
 0.921
STING1
Stimulator of interferon response cGAMP interactor 1.
     
 0.808
GOLGA7B
Golgin A7 family member B.
    
 0.792
GOLGA7
Golgin A7.
    
 0.786
TERB1
Telomere repeat binding bouquet formation protein 1.
    
 0.709
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.692
ZDHHC3
Zinc finger DHHC-type containing 3.
     
 0.656
ENSSARP00000002297
annotation not available
     
 0.649
ENSSARP00000002468
annotation not available
    
 
 0.644
LYPLA2
Lysophospholipase 2.
    
 
 0.640
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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