STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001099annotation not available (124 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B.
   
 0.742
APOE
Apolipoprotein E.
   
 0.742
VLDLR
Very low density lipoprotein receptor.
     
 0.701
APOM
Apolipoprotein M.
   
 
 0.701
ENSSARP00000002269
annotation not available
   
 
 0.692
LPL
Lipoprotein lipase.
     
 0.687
LDLR
Low density lipoprotein receptor.
     
 0.685
PLTP
Phospholipid transfer protein.
     
 0.683
LIPC
Lipase C, hepatic type.
     
  0.678
PEX3
Peroxisomal biogenesis factor 3.
     
  0.677
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.