Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENDOUEndonuclease, poly(U) specific. (373 aa)    
Predicted Functional Partners:
PAMR1
Peptidase domain containing associated with muscle regeneration 1.
      
 0.622
CXCL10
C-X-C motif chemokine ligand 10.
      
 0.616
ENSSARP00000002797
annotation not available
      
 0.611
RNGTT
RNA guanylyltransferase and 5'-phosphatase.
      
 0.594
IMPA2
Inositol monophosphatase 2.
      
 0.557
CLPTM1
CLPTM1 regulator of GABA type A receptor forward trafficking.
      
 0.514
TMEM45A
Transmembrane protein 45A.
      
 0.471
CTPS2
CTP synthase 2.
      
 0.461
CTPS1
CTP synthase 1.
      
 0.461
DDX55
DEAD-box helicase 55.
      
 0.437
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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