Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNTG2Syntrophin gamma 2. (479 aa)    
Predicted Functional Partners:
SNTB1
Syntrophin beta 1.
    
 0.990
SNTB2
Syntrophin beta 2.
    
 0.987
SGCE
Sarcoglycan epsilon.
   
 
 0.970
DTNA
Dystrobrevin alpha.
    
 0.966
SGCZ
Sarcoglycan zeta.
   
 
 0.963
SGCG
Sarcoglycan gamma.
   
 
 0.957
ENSSARP00000002588
annotation not available
    
 0.943
DMD
Dystrophin.
    
 0.943
SGCB
Sarcoglycan beta.
     
 0.938
ENSSARP00000006097
annotation not available
     
 0.931
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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