Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC16A12Solute carrier family 16 member 12. (482 aa)    
Predicted Functional Partners:
EMB
Embigin.
    
 0.656
ENSSARP00000002685
annotation not available
    
 
 0.618
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 
 0.609
PRPF6
pre-mRNA processing factor 6.
      
 0.589
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.586
TMEM212
Transmembrane protein 212.
      
 0.554
ANAPC7
Anaphase promoting complex subunit 7.
      
 0.553
ASB4
Ankyrin repeat and SOCS box containing 4.
    
 
 0.548
ENSSARP00000005869
annotation not available
      
 0.534
BFSP2
Beaded filament structural protein 2.
    
 
 0.491
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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