STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBSNRabenosyn, RAB effector. (776 aa)    
Predicted Functional Partners:
VPS45
Vacuolar protein sorting 45 homolog.
    
 0.998
ENSSARP00000000897
annotation not available
    
 0.974
ENSSARP00000010533
annotation not available
    
 0.961
RAB22A
RAB22A, member RAS oncogene family.
   
 0.958
ENSSARP00000012013
annotation not available
    
 0.945
RAB5B
RAB5B, member RAS oncogene family.
   
 0.938
RAB5A
RAB5A, member RAS oncogene family.
   
 0.934
ENSSARP00000004780
annotation not available
   
 0.931
ENSSARP00000003258
annotation not available
    
 0.895
ZHX2
Zinc fingers and homeoboxes 2.
  
 0.891
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.