STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG4BAutophagy related 4B cysteine peptidase. (370 aa)    
Predicted Functional Partners:
ENSSARP00000000417
annotation not available
   
 0.988
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.986
ENSSARP00000008265
annotation not available
   
 0.944
ENSSARP00000010704
annotation not available
   
 0.944
ENSSARP00000010127
annotation not available
   
 0.930
ENSSARP00000000371
annotation not available
   
 
 0.924
ENSSARP00000005763
annotation not available
   
 
 0.912
ATG4A
Autophagy related 4A cysteine peptidase.
  
  
0.884
ATG3
Autophagy related 3.
   
 
 0.873
ATG4D
Autophagy related 4D cysteine peptidase.
     
0.871
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.