ENSSARP00000001142 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSARP00000001142

annotation not available (84 aa)

Predicted Functional Partners:

TIMM9

0.999

TIMM10B

0.999

TIMM8B

0.998

TIMM22

0.996

ENSSARP00000000550

0.992

ENSSARP00000003680

0.987

ENSSARP00000001449

0.981

ENSSARP00000008335

0.939

ENSSARP00000008437

0.939

ENSSARP00000009341

0.926

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000000550	ENSSARP00000001142	ENSSARP00000000550	ENSSARP00000001142	annotation not available	annotation not available	0.992
ENSSARP00000000550	ENSSARP00000001449	ENSSARP00000000550	ENSSARP00000001449	annotation not available	annotation not available	0.775
ENSSARP00000000550	ENSSARP00000003680	ENSSARP00000000550	ENSSARP00000003680	annotation not available	annotation not available	0.941
ENSSARP00000000550	ENSSARP00000008335	ENSSARP00000000550	ENSSARP00000008335	annotation not available	annotation not available	0.729
ENSSARP00000000550	ENSSARP00000008437	ENSSARP00000000550	ENSSARP00000008437	annotation not available	annotation not available	0.729
ENSSARP00000000550	TIMM10B	ENSSARP00000000550	ENSSARP00000011605	annotation not available	Translocase of inner mitochondrial membrane 10B.	0.992
ENSSARP00000000550	TIMM22	ENSSARP00000000550	ENSSARP00000007053	annotation not available	Translocase of inner mitochondrial membrane 22.	0.991
ENSSARP00000000550	TIMM9	ENSSARP00000000550	ENSSARP00000010994	annotation not available	Translocase of inner mitochondrial membrane 9.	0.992
ENSSARP00000001142	ENSSARP00000000550	ENSSARP00000001142	ENSSARP00000000550	annotation not available	annotation not available	0.992
ENSSARP00000001142	ENSSARP00000001449	ENSSARP00000001142	ENSSARP00000001449	annotation not available	annotation not available	0.981
ENSSARP00000001142	ENSSARP00000003680	ENSSARP00000001142	ENSSARP00000003680	annotation not available	annotation not available	0.987
ENSSARP00000001142	ENSSARP00000008335	ENSSARP00000001142	ENSSARP00000008335	annotation not available	annotation not available	0.939
ENSSARP00000001142	ENSSARP00000008437	ENSSARP00000001142	ENSSARP00000008437	annotation not available	annotation not available	0.939
ENSSARP00000001142	ENSSARP00000009341	ENSSARP00000001142	ENSSARP00000009341	annotation not available	annotation not available	0.926
ENSSARP00000001142	TIMM10B	ENSSARP00000001142	ENSSARP00000011605	annotation not available	Translocase of inner mitochondrial membrane 10B.	0.999
ENSSARP00000001142	TIMM22	ENSSARP00000001142	ENSSARP00000007053	annotation not available	Translocase of inner mitochondrial membrane 22.	0.996
ENSSARP00000001142	TIMM8B	ENSSARP00000001142	ENSSARP00000003829	annotation not available	Translocase of inner mitochondrial membrane 8 homolog B.	0.998
ENSSARP00000001142	TIMM9	ENSSARP00000001142	ENSSARP00000010994	annotation not available	Translocase of inner mitochondrial membrane 9.	0.999
ENSSARP00000001449	ENSSARP00000000550	ENSSARP00000001449	ENSSARP00000000550	annotation not available	annotation not available	0.775
ENSSARP00000001449	ENSSARP00000001142	ENSSARP00000001449	ENSSARP00000001142	annotation not available	annotation not available	0.981