STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC39ATetratricopeptide repeat domain 39A. (573 aa)    
Predicted Functional Partners:
ENSSARP00000004116
annotation not available
      
 0.688
ST6GALNAC4
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4.
      
 0.563
ENSSARP00000001832
annotation not available
      
 0.544
DCAF5
DDB1 and CUL4 associated factor 5.
      
 0.539
SLC44A1
Solute carrier family 44 member 1.
      
 0.538
CTDSPL
CTD small phosphatase like.
      
 0.538
FBXO28
F-box protein 28.
      
 0.493
TMEM30A
Transmembrane protein 30A.
      
 0.485
CLIC2
Chloride intracellular channel 2.
      
 0.440
FBXO21
F-box protein 21.
   
  
 0.431
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.