Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001144annotation not available (238 aa)    
Predicted Functional Partners:
SPO11
SPO11 initiator of meiotic double stranded breaks.
    
 
 0.938
ICK
Intestinal cell kinase.
    
 
 0.876
ENSSARP00000007636
annotation not available
    
 
 0.876
DMC1
DNA meiotic recombinase 1.
    
 
 0.825
GRAMD2B
GRAM domain containing 2B.
    
   0.795
ERMN
Ermin.
   
  
 0.653
RFFL
Ring finger and FYVE like domain containing E3 ubiquitin protein ligase.
      
 0.616
ENSSARP00000012398
annotation not available
   
  
 0.602
PLP1
Proteolipid protein 1.
   
  
 0.598
ATR
ATR serine/threonine kinase.
    
 
 0.554
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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