STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001145annotation not available (678 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.809
AP5M1
Adaptor related protein complex 5 subunit mu 1.
    
 
 0.752
ARID4A
AT-rich interaction domain 4A.
    
 0.701
ARID4B
AT-rich interaction domain 4B.
    
 0.701
NIPSNAP3A
Nipsnap homolog 3A.
      
 0.700
ENSSARP00000005990
annotation not available
    
 0.686
YES1
YES proto-oncogene 1, Src family tyrosine kinase.
    
 0.665
TDRD3
Tudor domain containing 3.
    
 
 0.652
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.652
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
      
 0.650
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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