ENSSARP00000001148 protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSSARP00000001148

annotation not available (894 aa)

Predicted Functional Partners:

ENSSARP00000002354

0.998

TUFM

0.908

ENSSARP00000002827

0.844

ENSSARP00000009665

0.844

ENSSARP00000004284

0.823

ENSSARP00000006823

0.786

IKBKB

0.768

TRAF6

0.756

ENSSARP00000004167

0.731

NWD1

0.723

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001148	ENSSARP00000002354	ENSSARP00000001148	ENSSARP00000002354	annotation not available	annotation not available	0.998
ENSSARP00000001148	ENSSARP00000002827	ENSSARP00000001148	ENSSARP00000002827	annotation not available	annotation not available	0.844
ENSSARP00000001148	ENSSARP00000004167	ENSSARP00000001148	ENSSARP00000004167	annotation not available	annotation not available	0.731
ENSSARP00000001148	ENSSARP00000004284	ENSSARP00000001148	ENSSARP00000004284	annotation not available	annotation not available	0.823
ENSSARP00000001148	ENSSARP00000006823	ENSSARP00000001148	ENSSARP00000006823	annotation not available	annotation not available	0.786
ENSSARP00000001148	ENSSARP00000009665	ENSSARP00000001148	ENSSARP00000009665	annotation not available	annotation not available	0.844
ENSSARP00000001148	IKBKB	ENSSARP00000001148	ENSSARP00000007963	annotation not available	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.768
ENSSARP00000001148	NWD1	ENSSARP00000001148	ENSSARP00000003051	annotation not available	NACHT and WD repeat domain containing 1.	0.723
ENSSARP00000001148	TRAF6	ENSSARP00000001148	ENSSARP00000009873	annotation not available	TNF receptor associated factor 6.	0.756
ENSSARP00000001148	TUFM	ENSSARP00000001148	ENSSARP00000010130	annotation not available	Tu translation elongation factor, mitochondrial.	0.908
ENSSARP00000002354	ENSSARP00000001148	ENSSARP00000002354	ENSSARP00000001148	annotation not available	annotation not available	0.998
ENSSARP00000002354	ENSSARP00000006823	ENSSARP00000002354	ENSSARP00000006823	annotation not available	annotation not available	0.567
ENSSARP00000002354	IKBKB	ENSSARP00000002354	ENSSARP00000007963	annotation not available	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.996
ENSSARP00000002354	TRAF6	ENSSARP00000002354	ENSSARP00000009873	annotation not available	TNF receptor associated factor 6.	0.998
ENSSARP00000002354	TUFM	ENSSARP00000002354	ENSSARP00000010130	annotation not available	Tu translation elongation factor, mitochondrial.	0.469
ENSSARP00000002827	ENSSARP00000001148	ENSSARP00000002827	ENSSARP00000001148	annotation not available	annotation not available	0.844
ENSSARP00000002827	ENSSARP00000004167	ENSSARP00000002827	ENSSARP00000004167	annotation not available	annotation not available	0.414
ENSSARP00000002827	ENSSARP00000006823	ENSSARP00000002827	ENSSARP00000006823	annotation not available	annotation not available	0.872
ENSSARP00000002827	ENSSARP00000009665	ENSSARP00000002827	ENSSARP00000009665	annotation not available	annotation not available	0.986
ENSSARP00000002827	NWD1	ENSSARP00000002827	ENSSARP00000003051	annotation not available	NACHT and WD repeat domain containing 1.	0.665