Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBXN4UBX domain protein 4. (477 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 
 0.978
UBXN6
UBX domain protein 6.
    
 
 0.977
ENSSARP00000009719
annotation not available
    
 
 0.958
IP6K1
Inositol hexakisphosphate kinase 1.
    
   0.944
BCL11A
BAF chromatin remodeling complex subunit BCL11A.
    
   0.944
ENSSARP00000008524
annotation not available
    
 
 0.852
IP6K3
Inositol hexakisphosphate kinase 3.
    
   0.841
ENSSARP00000005815
annotation not available
    
   0.840
BANF1
Barrier to autointegration factor 1.
    
 
 0.838
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 
 0.834
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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