Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001154annotation not available (482 aa)    
Predicted Functional Partners:
ENSSARP00000005446
annotation not available
   
 0.992
ENSSARP00000003091
annotation not available
   
 
 0.991
WDR12
WD repeat domain 12.
   
 0.989
RPF2
Ribosome production factor 2 homolog.
   
 
 0.988
GNL2
G protein nucleolar 2.
   
 
 0.987
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 
 0.986
ENSSARP00000011056
annotation not available
   
 0.984
RRS1
Ribosome biogenesis regulator 1 homolog.
   
 
 0.983
ENSSARP00000006521
annotation not available
   
 
 0.974
NOP53
NOP53 ribosome biogenesis factor.
   
 
 0.968
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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