Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDZD3PDZ domain containing 3. (410 aa)    
Predicted Functional Partners:
ASAP3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
    
 
 0.807
SLC34A2
Solute carrier family 34 member 2.
   
 
 0.729
ENSSARP00000001313
annotation not available
    
 
 0.708
MYO3A
Myosin IIIA.
    
 0.684
MYO3B
Myosin IIIB.
    
 0.684
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.681
ENSSARP00000007168
annotation not available
    
 
 0.674
CFTR
CF transmembrane conductance regulator.
    
 0.657
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.624
RASL10B
RAS like family 10 member B.
    
 0.624
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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