Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSME4Proteasome activator subunit 4. (1671 aa)    
Predicted Functional Partners:
ENSSARP00000006270
annotation not available
    
 0.996
PSMA8
Proteasome 20S subunit alpha 8.
    
 0.996
PSMB9
Proteasome 20S subunit beta 9.
    
 0.995
PSMB7
Proteasome 20S subunit beta 7.
    
 0.995
PSMB10
Proteasome 20S subunit beta 10.
    
 0.988
PSMB6
Proteasome 20S subunit beta 6.
    
 0.985
ENSSARP00000008544
annotation not available
    
 0.981
PSMC6
Proteasome 26S subunit, ATPase 6.
   
 0.980
PSMD14
Proteasome 26S subunit, non-ATPase 14.
   
 0.977
PSMA3
Proteasome subunit alpha type-3.
    
 0.975
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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