CAPZA1 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

CAPZA1

Capping actin protein of muscle Z-line subunit alpha 1. (286 aa)

Predicted Functional Partners:

CAPZB

0.999

CAPZA2

0.997

MTPN

0.996

ENSSARP00000006544

0.995

ENSSARP00000009448

0.994

WASHC5

0.992

S100B

0.987

WASHC4

0.985

DCTN2

0.980

DCTN4

0.976

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAPZA1	CAPZA2	ENSSARP00000001169	ENSSARP00000006550	Capping actin protein of muscle Z-line subunit alpha 1.	Capping actin protein of muscle Z-line subunit alpha 2.	0.997
CAPZA1	CAPZB	ENSSARP00000001169	ENSSARP00000001747	Capping actin protein of muscle Z-line subunit alpha 1.	Capping actin protein of muscle Z-line subunit beta.	0.999
CAPZA1	DCTN2	ENSSARP00000001169	ENSSARP00000011795	Capping actin protein of muscle Z-line subunit alpha 1.	Dynactin subunit 2.	0.980
CAPZA1	DCTN4	ENSSARP00000001169	ENSSARP00000012121	Capping actin protein of muscle Z-line subunit alpha 1.	Dynactin subunit 4.	0.976
CAPZA1	ENSSARP00000006544	ENSSARP00000001169	ENSSARP00000006544	Capping actin protein of muscle Z-line subunit alpha 1.	annotation not available	0.995
CAPZA1	ENSSARP00000009448	ENSSARP00000001169	ENSSARP00000009448	Capping actin protein of muscle Z-line subunit alpha 1.	annotation not available	0.994
CAPZA1	MTPN	ENSSARP00000001169	ENSSARP00000008762	Capping actin protein of muscle Z-line subunit alpha 1.	Myotrophin.	0.996
CAPZA1	S100B	ENSSARP00000001169	ENSSARP00000010431	Capping actin protein of muscle Z-line subunit alpha 1.	S100 calcium binding protein B.	0.987
CAPZA1	WASHC4	ENSSARP00000001169	ENSSARP00000012173	Capping actin protein of muscle Z-line subunit alpha 1.	WASH complex subunit 4.	0.985
CAPZA1	WASHC5	ENSSARP00000001169	ENSSARP00000007863	Capping actin protein of muscle Z-line subunit alpha 1.	WASH complex subunit 5.	0.992
CAPZA2	CAPZA1	ENSSARP00000006550	ENSSARP00000001169	Capping actin protein of muscle Z-line subunit alpha 2.	Capping actin protein of muscle Z-line subunit alpha 1.	0.997
CAPZA2	CAPZB	ENSSARP00000006550	ENSSARP00000001747	Capping actin protein of muscle Z-line subunit alpha 2.	Capping actin protein of muscle Z-line subunit beta.	0.998
CAPZA2	DCTN2	ENSSARP00000006550	ENSSARP00000011795	Capping actin protein of muscle Z-line subunit alpha 2.	Dynactin subunit 2.	0.975
CAPZA2	DCTN4	ENSSARP00000006550	ENSSARP00000012121	Capping actin protein of muscle Z-line subunit alpha 2.	Dynactin subunit 4.	0.975
CAPZA2	ENSSARP00000006544	ENSSARP00000006550	ENSSARP00000006544	Capping actin protein of muscle Z-line subunit alpha 2.	annotation not available	0.975
CAPZA2	ENSSARP00000009448	ENSSARP00000006550	ENSSARP00000009448	Capping actin protein of muscle Z-line subunit alpha 2.	annotation not available	0.972
CAPZA2	MTPN	ENSSARP00000006550	ENSSARP00000008762	Capping actin protein of muscle Z-line subunit alpha 2.	Myotrophin.	0.972
CAPZA2	S100B	ENSSARP00000006550	ENSSARP00000010431	Capping actin protein of muscle Z-line subunit alpha 2.	S100 calcium binding protein B.	0.989
CAPZA2	WASHC4	ENSSARP00000006550	ENSSARP00000012173	Capping actin protein of muscle Z-line subunit alpha 2.	WASH complex subunit 4.	0.982
CAPZA2	WASHC5	ENSSARP00000006550	ENSSARP00000007863	Capping actin protein of muscle Z-line subunit alpha 2.	WASH complex subunit 5.	0.981