Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HORMAD2HORMA domain containing 2. (304 aa)    
Predicted Functional Partners:
DMC1
DNA meiotic recombinase 1.
   
 
 0.882
ENSSARP00000000151
annotation not available
      
 0.756
SYCE1
Synaptonemal complex central element protein 1.
      
 0.755
MSH4
mutS homolog 4.
   
  
 0.697
SPO11
SPO11 initiator of meiotic double stranded breaks.
   
  
 0.646
ENSSARP00000002634
annotation not available
      
 0.643
REC8
REC8 meiotic recombination protein.
   
 
 0.639
ENSSARP00000008313
annotation not available
   
 
 0.635
SYCP3
Synaptonemal complex protein 3.
   
 
 0.633
BBS9
Bardet-Biedl syndrome 9.
      
 0.608
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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