Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SARS1seryl-tRNA synthetase 1. (529 aa)    
Predicted Functional Partners:
SUPT20H
SPT20 homolog, SAGA complex component.
    
 0.985
TADA2A
Transcriptional adaptor 2A.
    
 0.983
ENSSARP00000003100
annotation not available
    
 0.982
TAF9
TATA-box binding protein associated factor 9.
    
 0.982
KAT2B
Lysine acetyltransferase 2B.
    
 0.980
ENSSARP00000008368
annotation not available
    
 0.980
TRRAP
Transformation/transcription domain associated protein.
    
 0.978
TADA1
Transcriptional adaptor 1.
    
  0.977
METTL6
Methyltransferase like 6.
    
 
 0.969
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 0.967
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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