Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001199annotation not available (1186 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.996
RIMS1
Regulating synaptic membrane exocytosis 1.
   
 0.955
ENSSARP00000007661
annotation not available
   
 0.930
ENSSARP00000004628
annotation not available
   
 0.887
ENSSARP00000005472
annotation not available
    
 0.861
SNAP25
Synaptosome associated protein 25.
   
 0.846
SYT1
Synaptotagmin 1.
   
 
 0.823
ENSSARP00000000628
annotation not available
    
 0.814
ENSSARP00000000084
annotation not available
    
 0.790
STX4
Syntaxin 4.
    
 0.790
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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