STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM114A1Family with sequence similarity 114 member A1. (523 aa)    
Predicted Functional Partners:
ENSSARP00000007056
annotation not available
    
   0.630
RFC1
Replication factor C subunit 1.
      
 0.620
TMEM156
Transmembrane protein 156.
      
 0.620
ENSSARP00000012446
annotation not available
      
 0.616
LIAS
Lipoic acid synthetase.
   
  
 0.565
PDS5A
PDS5 cohesin associated factor A.
      
 0.501
KLHL5
Kelch like family member 5.
   
  
 0.437
N4BP2
NEDD4 binding protein 2.
      
 0.431
ENSSARP00000005580
annotation not available
      
 0.421
UBE2K
Ubiquitin conjugating enzyme E2 K.
      
 0.414
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.