Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001205annotation not available (556 aa)    
Predicted Functional Partners:
KATNA1
Katanin catalytic subunit A1.
   
 0.999
KATNAL1
Katanin catalytic subunit A1 like 1.
   
 0.998
KATNBL1
Katanin regulatory subunit B1 like 1.
    
 0.996
ENSSARP00000001071
annotation not available
   
 0.995
ASPM
Abnormal spindle microtubule assembly.
    
 
 0.928
SPAST
Spastin.
    
 0.896
ENSSARP00000003935
annotation not available
    
 
 0.830
PFDN1
Prefoldin subunit 1.
    
   0.793
FIGN
Fidgetin, microtubule severing factor.
    
 0.734
ENSSARP00000004569
annotation not available
    
 0.734
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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