STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD51BRAD51 paralog B. (353 aa)    
Predicted Functional Partners:
SFR1
Swi5-dependent recombination DNA repair protein 1 homolog.
    
 0.996
WRN
WRN RecQ like helicase.
  
 0.994
ENSSARP00000000796
annotation not available
   
 0.993
BRCA2
BRCA2 DNA repair associated.
   
 0.988
FANCM
FA complementation group M.
   
 0.976
DMC1
DNA meiotic recombinase 1.
   
0.974
RAD52
RAD52 homolog, DNA repair protein.
    
 0.964
ENSSARP00000011203
annotation not available
  
 0.958
RPA1
Replication protein A1.
  
 0.934
EXO1
Exonuclease 1.
  
 0.934
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.