STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMED5Transmembrane p24 trafficking protein 5. (217 aa)    
Predicted Functional Partners:
TMED2
Transmembrane p24 trafficking protein 2.
   
 
0.789
TMED10
Transmembrane p24 trafficking protein 10.
   
 
 0.784
WNT10A
Wnt family member 10A.
    
  0.667
TMED4
Transmembrane p24 trafficking protein 4.
    
 
 0.651
SYPL1
Synaptophysin like 1.
      
 0.622
WNT8B
Wnt family member 8B.
    
 0.582
ENSSARP00000005463
annotation not available
    
 0.582
WNT16
Wnt family member 16.
    
 0.582
MYSM1
Myb like, SWIRM and MPN domains 1.
      
 0.546
ENSSARP00000003527
annotation not available
      
 0.542
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.