STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CELSR2Cadherin EGF LAG seven-pass G-type receptor 2. (2753 aa)    
Predicted Functional Partners:
VANGL1
VANGL planar cell polarity protein 1.
    
 0.945
FAT3
FAT atypical cadherin 3.
   
 0.887
CDH20
Cadherin 20.
    
  0.866
ENSSARP00000010933
annotation not available
    
  0.866
ENSSARP00000011388
annotation not available
    
  0.865
CDH18
Cadherin 18.
    
  0.864
ENSSARP00000011359
annotation not available
    
  0.864
PCDH15
Protocadherin related 15.
    
 0.858
PSRC1
Proline and serine rich coiled-coil 1.
      
 0.857
JUP
Junction plakoglobin.
     
 0.786
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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