Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000001238annotation not available (187 aa)    
Predicted Functional Partners:
ENSSARP00000001578
annotation not available
   
   0.814
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
   
    0.656
ALKBH1
alkB homolog 1, histone H2A dioxygenase.
      
 0.620
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.612
ENSSARP00000007686
annotation not available
      
 0.569
PMS1
PMS1 homolog 1, mismatch repair system component.
     
 0.562
ALKBH8
alkB homolog 8, tRNA methyltransferase.
      
 0.561
ENSSARP00000011665
annotation not available
   
   0.544
ENSSARP00000012972
annotation not available
   
  
 0.507
DCTPP1
dCTP pyrophosphatase 1.
      
 0.472
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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