STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD1Adducin 1. (566 aa)    
Predicted Functional Partners:
ADD3
Adducin 3.
   
  0.999
ADD2
Adducin 2.
   
 0.995
ANKRD29
Ankyrin repeat domain 29.
    
  0.949
MTPN
Myotrophin.
    
  0.905
DPPA4
Developmental pluripotency associated 4.
    
   0.901
ENSSARP00000011050
annotation not available
   
 0.901
CAPZA1
Capping actin protein of muscle Z-line subunit alpha 1.
     
 0.875
TMOD1
Tropomodulin 1.
    
 
 0.873
CAPZB
Capping actin protein of muscle Z-line subunit beta.
     
 0.872
CAPZA2
Capping actin protein of muscle Z-line subunit alpha 2.
     
 0.856
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.