Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBFA2T2CBFA2/RUNX1 partner transcriptional co-repressor 2. (581 aa)    
Predicted Functional Partners:
ENSSARP00000012915
annotation not available
    
 0.979
PRDM6
PR/SET domain 6.
    
 
 0.946
RUNX1T1
RUNX1 partner transcriptional co-repressor 1.
   
   0.945
ENSSARP00000001939
annotation not available
   
 
 0.944
NUDCD1
NudC domain containing 1.
    
   0.894
NCOA3
Nuclear receptor coactivator 3.
    
 0.832
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
  
 0.819
MED6
Mediator complex subunit 6.
    
 0.806
MED10
Mediator of RNA polymerase II transcription subunit 10.
    
 0.806
ENSSARP00000010347
annotation not available
    
 0.805
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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